https://wiki.esipfed.org/w/api.php?action=feedcontributions&user=Nicholas.m.weber&feedformat=atomEarth Science Information Partners (ESIP) - User contributions [en]2024-03-19T08:52:50ZUser contributionsMediaWiki 1.35.14https://wiki.esipfed.org/w/index.php?title=Science_Software&diff=49543Science Software2015-05-17T21:28:45Z<p>Nicholas.m.weber: /* Active Collaborations */</p>
<hr />
<div>__NOTOC__<br />
<big><center>'''Welcome to the {{PAGENAME}} Cluster'''</center></big><br />
<br />
The overarching objective of the ESIP Science Software Cluster is to <br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="#FFFFFF"<br />
|bgcolor="lightgreen" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
===[[/Archived Software Science Events|Events and Activities]]===<br />
<br />
* 2015-01-16 Telecon [[Telecon Agenda & Notes]]<br />
{{:Science Software/Archived Software Science Events}}<br><br />
[[/Archived Software Science Events|Archive]]<br />
<br />
=== ESIP Meeting Notes ===<br />
2015 [[Winter Meeting]]<br />
<br />
|bgcolor="lightblue" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Ongoing Work===<br />
<br />
* Principles for software stewardship [https://github.com/ESIPFed/Software-Stewardship-Principles/wiki Github Repository ]<br />
<br />
===Active Collaborations===<br />
* Software Institutes<br />
** Institute for Sustainable Earth and Environmental Software (ISEES) - http://isees.nceas.ucsb.edu<br />
**Water Science Software Institute (WSSI) - http://waters2i2.org<br />
*Outputs<br />
** WSSSPE 2 Paper [[http://commons.esipfed.org/node/2633]]<br />
** Slides from Winter 2015 meeting [[http://commons.esipfed.org/sites/default/files/LenhardtSoftwareClusterSession.pptx]]<br />
|}<br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="pink"<br />
|bgcolor="pink" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Resources===<br />
*[http://software-carpentry.org Software Carpentry]<br />
*[http://www.software.ac.uk Software Sustainability Institute (UK)]<br />
<br />
===Lit===<br />
*[http://www.mendeley.com/groups/3580621/esip-science-software-cluster/ Mendeley Reading Group on SciSoftware]<br />
<br />
===Blogs we like===<br />
* [http://neverworkintheory.org/ It will never work in theory]<br />
* [http://www.software.ac.uk/blog SSI Blog]<br />
* [http://ropensci.org/blog/ R OpenSci] <br />
* [http://software-carpentry.org/blog/index.html SWC Blog]<br />
* [http://www.third-bit.com/ 3rd bit]<br />
* [http://aosabook.org/blog/ AOSA]<br />
* [http://www.openscience.org/blog/ OpenScience Project]<br />
|bgcolor="#FFFFBB" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
=== Get Involved===<br />
* '''Email List:''' [http://lists.esipfed.org/mailman/listinfo/esip-sciencesoftware ESIP-Science Software]<br />
* '''[[/ScienceSoftware_Telecons|Telecons:]]'''<br />
** 2 ET, Third Friday of each month; <br />
**Phone: 1-877-668-4493<br />
**Meeting Code: 23136782 <br />
* '''Cluster Contacts:''' Chris Lenhardt; Nic Weber<br />
<br />
|}<br />
<br /><br />
<br />
<br />
<br />
<br />
{{Backlink}}<br />
[[WS::{{PAGENAMEE}}]][[category:CollabArea]]</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=Telecon_Agenda_%26_Notes&diff=49542Telecon Agenda & Notes2015-05-17T20:54:31Z<p>Nicholas.m.weber: Created page with "Science Software culture telecon meeting notes: 05.16.2015 On call: * Annie Burgess * Bob Downs * Chris Lenhardt * Erin Robinson * Nic Weber === Ideas for what we might..."</p>
<hr />
<div>Science Software culture telecon meeting notes: 05.16.2015<br />
<br />
On call: <br />
<br />
* Annie Burgess <br />
* Bob Downs <br />
* Chris Lenhardt<br />
* Erin Robinson <br />
* Nic Weber<br />
<br />
=== Ideas for what we might do in future months… ===<br />
<br />
* Combine our efforts with Force 11 group on Software Citation principles [https://www.force11.org/group/software-citation-working-group link]<br />
* Pick up on any of the available topics from RENCI Workshop for data and software citation [https://softwaredatacitation.renci.org/Pages/home.aspx link]<br />
* Collaborating with documentation or data stewardship clusters on future work towards principles for sustainable software stewardship. [more below]<br />
<br />
== Principles for Sustainable Software Stewardship ==<br />
<br />
* By principles we mean what activities / actions should be taken to ensure software remains accessible, and useful over the long-term.<br /><br />
* And in what ways these principles are unique to ESIP stakeholders.<br />
* Should be like science software best practices… but not about engineering of software alone.<br />
* The inspiration for this activity is the data stewardship principles that describe responsible curation of earth science data, without being prescriptive of how those curation activities are to be implemented / carried out<br />
* Our hope is to have some sort of community-wide ESIP revision of these principles and a vote of some kind for their acceptance (?)<br />
<br />
== Principles for Data Stewardship ==<br />
<br />
* Were voted on by ESIP general assembly<br />
* Were approved as a “policy recommendation” by ESIP<br />
* Received extensive input from technology cluster<br />
* 2 to 3 pages, bulleted points that identify stakeholders and responsibilities.<br />
<br />
== Next steps for this effort: ==<br />
<br />
# Chris will draft emails for potential speakers during our summer meeting.<br />
# High level document for stewarding software outline. This might include following topics<br />
#* Documentation (should recognize the funder)<br />
#* Recommended citation<br />
#* Recommended license<br /><br />
#* hosting (where lives)<br />
# Second “related topics” document<br />
#* gather project that may be already working on some of these issues<br />
#* provide place for contributions.<br />
# Next meeting: 06/19 or 06/26 ?</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=Science_Software&diff=49541Science Software2015-05-17T20:54:00Z<p>Nicholas.m.weber: /* Events and Activities */</p>
<hr />
<div>__NOTOC__<br />
<big><center>'''Welcome to the {{PAGENAME}} Cluster'''</center></big><br />
<br />
The overarching objective of the ESIP Science Software Cluster is to <br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="#FFFFFF"<br />
|bgcolor="lightgreen" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
===[[/Archived Software Science Events|Events and Activities]]===<br />
<br />
* 2015-01-16 Telecon [[Telecon Agenda & Notes]]<br />
{{:Science Software/Archived Software Science Events}}<br><br />
[[/Archived Software Science Events|Archive]]<br />
<br />
=== ESIP Meeting Notes ===<br />
2015 [[Winter Meeting]]<br />
<br />
|bgcolor="lightblue" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Active Collaborations===<br />
* Software Institutes<br />
** Institute for Sustainable Earth and Environmental Software (ISEES) - http://isees.nceas.ucsb.edu<br />
**Water Science Software Institute (WSSI) - http://waters2i2.org<br />
*Outputs<br />
** WSSSPE 2 Paper [[http://commons.esipfed.org/node/2633]]<br />
** Slides from Winter 2015 meeting [[http://commons.esipfed.org/sites/default/files/LenhardtSoftwareClusterSession.pptx]]<br />
|}<br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="pink"<br />
|bgcolor="pink" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Resources===<br />
*[http://software-carpentry.org Software Carpentry]<br />
*[http://www.software.ac.uk Software Sustainability Institute (UK)]<br />
<br />
===Lit===<br />
*[http://www.mendeley.com/groups/3580621/esip-science-software-cluster/ Mendeley Reading Group on SciSoftware]<br />
<br />
===Blogs we like===<br />
* [http://neverworkintheory.org/ It will never work in theory]<br />
* [http://www.software.ac.uk/blog SSI Blog]<br />
* [http://ropensci.org/blog/ R OpenSci] <br />
* [http://software-carpentry.org/blog/index.html SWC Blog]<br />
* [http://www.third-bit.com/ 3rd bit]<br />
* [http://aosabook.org/blog/ AOSA]<br />
* [http://www.openscience.org/blog/ OpenScience Project]<br />
|bgcolor="#FFFFBB" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
=== Get Involved===<br />
* '''Email List:''' [http://lists.esipfed.org/mailman/listinfo/esip-sciencesoftware ESIP-Science Software]<br />
* '''[[/ScienceSoftware_Telecons|Telecons:]]'''<br />
** 2 ET, Third Friday of each month; <br />
**Phone: 1-877-668-4493<br />
**Meeting Code: 23136782 <br />
* '''Cluster Contacts:''' Chris Lenhardt; Nic Weber<br />
<br />
|}<br />
<br /><br />
<br />
<br />
<br />
<br />
{{Backlink}}<br />
[[WS::{{PAGENAMEE}}]][[category:CollabArea]]</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=Winter_Meeting&diff=48594Winter Meeting2015-01-08T18:41:33Z<p>Nicholas.m.weber: </p>
<hr />
<div>'''ESIP Software Sustainability Session'''<br />
<br />
--- <br />
<br />
Bob Downs started off by answering some questions about activity undertaken at Summer Meeting 2014:<br />
<br />
"Why seek ESIP perspectives on Science Software Sustainability?" While the ESIP community has been successful at articulating best practices around data management, software has been relatively unaddressed. This is surprising, given the fact that software and issues in data management, such as data quality, reproducibility, etc. are tightly coupled. So, a first step in developing best practices in software stewardship should include a base-line assessment of what the ESIP community's best practices are, and what they see as important. Essentially, we asked "how do we treat and sustain software that makes that make data meaningful?" <br />
<br />
<br />
Next, Chris offered findings from the exercise, as described in the following paper (http://commons.esipfed.org/node/2633) and set of slides (http://commons.esipfed.org/sites/default/files/LenhardtSoftwareClusterSession.pptx). <br />
<br />
---<br />
<br />
'''Discussion'''<br />
<br />
Joe Hurcle - On first recommendation - The best way to get science input is to go to them....<br />
<br />
<br />
We should agree upon and promote a group definition of sustainability. Further, we should - in a basic way - say what we mean when we say software. What are the boundaries of this group? Finally, we should use these definitions to identify ways that we can support that with software. <br />
<br />
- One suggestion is to look at work from XCEDE workshops, and model best practices as articulated by HPC community. <br />
<br />
--- <br />
<br />
Decadal survey should include some discussion of software engineering priorities <br />
<br />
'''Next Telecon session'''<br />
<br />
- January 16th - 2pm EST. <br />
<br />
Agenda items: <br />
<br />
- Software Carpentry - we should decide whether or not this is a session we would like to support. <br />
- Use cases we might like to see this group take on for summer session (around documentation, variable names, etc)<br />
- Organize ourselves to move towards a short course in software. <br />
<br />
--- <br />
<br />
'''For next meeting'''<br />
<br />
Nic will develop a template for use cases (i.e. what are the metadata that we want to collect)<br />
<br />
- The problem <br />
<br />
- The ESIP setting for the problem<br />
<br />
- What is a sustainable software practice - what is ideal and what works and what does not?</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=Winter_Meeting&diff=48593Winter Meeting2015-01-08T18:40:30Z<p>Nicholas.m.weber: Created page with "**ESIP Software Sustainability Session** --- Bob Downs started off by answering some questions about activity undertaken at Summer Meeting 2014: "Why seek ESIP perspectiv..."</p>
<hr />
<div>**ESIP Software Sustainability Session**<br />
<br />
<br />
--- <br />
<br />
Bob Downs started off by answering some questions about activity undertaken at Summer Meeting 2014:<br />
<br />
"Why seek ESIP perspectives on Science Software Sustainability?" While the ESIP community has been successful at articulating best practices around data management, software has been relatively unaddressed. This is surprising, given the fact that software and issues in data management, such as data quality, reproducibility, etc. are tightly coupled. So, a first step in developing best practices in software stewardship should include a base-line assessment of what the ESIP community's best practices are, and what they see as important. Essentially, we asked "how do we treat and sustain software that makes that make data meaningful?" <br />
<br />
<br />
Next, Chris offered findings from the exercise, as described in the following paper (http://commons.esipfed.org/node/2633) and set of slides (http://commons.esipfed.org/sites/default/files/LenhardtSoftwareClusterSession.pptx). <br />
<br />
---<br />
<br />
**Discussion**<br />
<br />
Joe Hurcle - On first recommendation - The best way to get science input is to go to them....<br />
<br />
<br />
We should agree upon and promote a group definition of sustainability. Further, we should - in a basic way - say what we mean when we say software. What are the boundaries of this group? Finally, we should use these definitions to identify ways that we can support that with software. <br />
<br />
- One suggestion is to look at work from XCEDE workshops, and model best practices as articulated by HPC community. <br />
<br />
--- <br />
<br />
Decadal survey should include some discussion of software engineering priorities <br />
<br />
**Next Telecon session**<br />
<br />
- January 16th - 2pm EST. <br />
<br />
Agenda items: <br />
<br />
- Software Carpentry - we should decide whether or not this is a session we would like to support. <br />
- Use cases we might like to see this group take on for summer session (around documentation, variable names, etc)<br />
- Organize ourselves to move towards a short course in software. <br />
<br />
--- <br />
<br />
**For next meeting***<br />
<br />
Nic will develop a template for use cases (i.e. what are the metadata that we want to collect)<br />
<br />
- The problem <br />
<br />
- The ESIP setting for the problem<br />
<br />
- What is a sustainable software practice - what is ideal and what works and what does not?</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=Science_Software&diff=48592Science Software2015-01-08T18:40:15Z<p>Nicholas.m.weber: </p>
<hr />
<div>__NOTOC__<br />
<big><center>'''Welcome to the {{PAGENAME}} Cluster'''</center></big><br />
<br />
The overarching objective of the ESIP Science Software Cluster is to <br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="#FFFFFF"<br />
|bgcolor="lightgreen" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
===[[/Archived Software Science Events|Events and Activities]]===<br />
{{:Science Software/Archived Software Science Events}}<br><br />
[[/Archived Software Science Events|Archive]]<br />
<br />
=== ESIP Meeting Notes ===<br />
2015 [[Winter Meeting]]<br />
<br />
|bgcolor="lightblue" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Active Collaborations===<br />
* Software Institutes<br />
** Institute for Sustainable Earth and Environmental Software (ISEES) - http://isees.nceas.ucsb.edu<br />
**Water Science Software Institute (WSSI) - http://waters2i2.org<br />
*Outputs<br />
** WSSSPE 2 Paper [[http://commons.esipfed.org/node/2633]]<br />
** Slides from Winter 2015 meeting [[http://commons.esipfed.org/sites/default/files/LenhardtSoftwareClusterSession.pptx]]<br />
|}<br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="pink"<br />
|bgcolor="pink" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Resources===<br />
*[http://software-carpentry.org Software Carpentry]<br />
*[http://www.software.ac.uk Software Sustainability Institute (UK)]<br />
<br />
===Lit===<br />
*[http://www.mendeley.com/groups/3580621/esip-science-software-cluster/ Mendeley Reading Group on SciSoftware]<br />
<br />
===Blogs we like===<br />
* [http://neverworkintheory.org/ It will never work in theory]<br />
* [http://www.software.ac.uk/blog SSI Blog]<br />
* [http://ropensci.org/blog/ R OpenSci] <br />
* [http://software-carpentry.org/blog/index.html SWC Blog]<br />
* [http://www.third-bit.com/ 3rd bit]<br />
* [http://aosabook.org/blog/ AOSA]<br />
* [http://www.openscience.org/blog/ OpenScience Project]<br />
|bgcolor="#FFFFBB" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
=== Get Involved===<br />
* '''Email List:''' [http://rtpnet.org/mailman/listinfo/esip-sciencesoftware ESIP-Science Software]<br />
* '''[[/ScienceSoftware_Telecons|Telecons:]]'''<br />
** 3 ET, Second Wednesday of each month; <br />
**Phone: 1-877-668-4493<br />
**Meeting Code: 23136782 <br />
* '''Cluster Contacts:''' Chris Lenhardt; Nic Weber<br />
<br />
|}<br />
<br /><br />
<br />
<br />
<br />
<br />
{{Backlink}}<br />
[[WS::{{PAGENAMEE}}]][[category:CollabArea]]</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=Science_Software&diff=48591Science Software2015-01-08T18:39:36Z<p>Nicholas.m.weber: /* Events and Activities */</p>
<hr />
<div>__NOTOC__<br />
<big><center>'''Welcome to the {{PAGENAME}} Cluster'''</center></big><br />
<br />
The overarching objective of the ESIP Science Software Cluster is to <br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="#FFFFFF"<br />
|bgcolor="lightgreen" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
===[[/Archived Software Science Events|Events and Activities]]===<br />
{{:Science Software/Archived Software Science Events}}<br><br />
[[/Archived Software Science Events|Archive]]<br />
<br />
=== ESIP Meeting Notes ===<br />
2015 [Winter Meeting]<br />
<br />
|bgcolor="lightblue" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Active Collaborations===<br />
* Software Institutes<br />
** Institute for Sustainable Earth and Environmental Software (ISEES) - http://isees.nceas.ucsb.edu<br />
**Water Science Software Institute (WSSI) - http://waters2i2.org<br />
*Outputs<br />
** WSSSPE 2 Paper [[http://commons.esipfed.org/node/2633]]<br />
** Slides from Winter 2015 meeting [[http://commons.esipfed.org/sites/default/files/LenhardtSoftwareClusterSession.pptx]]<br />
|}<br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="pink"<br />
|bgcolor="pink" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Resources===<br />
*[http://software-carpentry.org Software Carpentry]<br />
*[http://www.software.ac.uk Software Sustainability Institute (UK)]<br />
<br />
===Lit===<br />
*[http://www.mendeley.com/groups/3580621/esip-science-software-cluster/ Mendeley Reading Group on SciSoftware]<br />
<br />
===Blogs we like===<br />
* [http://neverworkintheory.org/ It will never work in theory]<br />
* [http://www.software.ac.uk/blog SSI Blog]<br />
* [http://ropensci.org/blog/ R OpenSci] <br />
* [http://software-carpentry.org/blog/index.html SWC Blog]<br />
* [http://www.third-bit.com/ 3rd bit]<br />
* [http://aosabook.org/blog/ AOSA]<br />
* [http://www.openscience.org/blog/ OpenScience Project]<br />
|bgcolor="#FFFFBB" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
=== Get Involved===<br />
* '''Email List:''' [http://rtpnet.org/mailman/listinfo/esip-sciencesoftware ESIP-Science Software]<br />
* '''[[/ScienceSoftware_Telecons|Telecons:]]'''<br />
** 3 ET, Second Wednesday of each month; <br />
**Phone: 1-877-668-4493<br />
**Meeting Code: 23136782 <br />
* '''Cluster Contacts:''' Chris Lenhardt; Nic Weber<br />
<br />
|}<br />
<br /><br />
<br />
<br />
<br />
<br />
{{Backlink}}<br />
[[WS::{{PAGENAMEE}}]][[category:CollabArea]]</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=Science_Software&diff=48590Science Software2015-01-08T18:38:27Z<p>Nicholas.m.weber: </p>
<hr />
<div>__NOTOC__<br />
<big><center>'''Welcome to the {{PAGENAME}} Cluster'''</center></big><br />
<br />
The overarching objective of the ESIP Science Software Cluster is to <br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="#FFFFFF"<br />
|bgcolor="lightgreen" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
===[[/Archived Software Science Events|Events and Activities]]===<br />
{{:Science Software/Archived Software Science Events}}<br><br />
[[/Archived Software Science Events|Archive]]<br />
<br />
|bgcolor="lightblue" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Active Collaborations===<br />
* Software Institutes<br />
** Institute for Sustainable Earth and Environmental Software (ISEES) - http://isees.nceas.ucsb.edu<br />
**Water Science Software Institute (WSSI) - http://waters2i2.org<br />
*Outputs<br />
** WSSSPE 2 Paper [[http://commons.esipfed.org/node/2633]]<br />
** Slides from Winter 2015 meeting [[http://commons.esipfed.org/sites/default/files/LenhardtSoftwareClusterSession.pptx]]<br />
|}<br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="pink"<br />
|bgcolor="pink" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Resources===<br />
*[http://software-carpentry.org Software Carpentry]<br />
*[http://www.software.ac.uk Software Sustainability Institute (UK)]<br />
<br />
===Lit===<br />
*[http://www.mendeley.com/groups/3580621/esip-science-software-cluster/ Mendeley Reading Group on SciSoftware]<br />
<br />
===Blogs we like===<br />
* [http://neverworkintheory.org/ It will never work in theory]<br />
* [http://www.software.ac.uk/blog SSI Blog]<br />
* [http://ropensci.org/blog/ R OpenSci] <br />
* [http://software-carpentry.org/blog/index.html SWC Blog]<br />
* [http://www.third-bit.com/ 3rd bit]<br />
* [http://aosabook.org/blog/ AOSA]<br />
* [http://www.openscience.org/blog/ OpenScience Project]<br />
|bgcolor="#FFFFBB" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
=== Get Involved===<br />
* '''Email List:''' [http://rtpnet.org/mailman/listinfo/esip-sciencesoftware ESIP-Science Software]<br />
* '''[[/ScienceSoftware_Telecons|Telecons:]]'''<br />
** 3 ET, Second Wednesday of each month; <br />
**Phone: 1-877-668-4493<br />
**Meeting Code: 23136782 <br />
* '''Cluster Contacts:''' Chris Lenhardt; Nic Weber<br />
<br />
|}<br />
<br /><br />
<br />
<br />
<br />
<br />
{{Backlink}}<br />
[[WS::{{PAGENAMEE}}]][[category:CollabArea]]</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=Science_Software&diff=48589Science Software2015-01-08T18:24:59Z<p>Nicholas.m.weber: </p>
<hr />
<div>__NOTOC__<br />
<big><center>'''Welcome to the {{PAGENAME}} Cluster'''</center></big><br />
<br />
The overarching objective of the ESIP Science Software Cluster is to <br />
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|- valign="top" bgcolor="#FFFFFF"<br />
|bgcolor="lightgreen" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
===[[/Archived Software Science Events|Events and Activities]]===<br />
{{:Science Software/Archived Software Science Events}}<br><br />
[[/Archived Software Science Events|Archive]]<br />
<br />
|bgcolor="lightblue" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Active Collaborations===<br />
* Software Institutes<br />
** Institute for Sustainable Earth and Environmental Software (ISEES) - http://isees.nceas.ucsb.edu<br />
**Water Science Software Institute (WSSI) - http://waters2i2.org<br />
*Outputs<br />
** WSSSPE 2 Paper [[http://commons.esipfed.org/node/2633]]<br />
** Slides from Winter 2015 meeting [[]]<br />
|}<br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="pink"<br />
|bgcolor="pink" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Resources===<br />
*[http://software-carpentry.org Software Carpentry]<br />
*[http://www.software.ac.uk Software Sustainability Institute (UK)]<br />
<br />
===Lit===<br />
*[http://www.mendeley.com/groups/3580621/esip-science-software-cluster/ Mendeley Reading Group on SciSoftware]<br />
<br />
===Blogs we like===<br />
* [http://neverworkintheory.org/ It will never work in theory]<br />
* [http://www.software.ac.uk/blog SSI Blog]<br />
* [http://ropensci.org/blog/ R OpenSci] <br />
* [http://software-carpentry.org/blog/index.html SWC Blog]<br />
* [http://www.third-bit.com/ 3rd bit]<br />
* [http://aosabook.org/blog/ AOSA]<br />
* [http://www.openscience.org/blog/ OpenScience Project]<br />
|bgcolor="#FFFFBB" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
=== Get Involved===<br />
* '''Email List:''' [http://rtpnet.org/mailman/listinfo/esip-sciencesoftware ESIP-Science Software]<br />
* '''[[/ScienceSoftware_Telecons|Telecons:]]'''<br />
** 3 ET, Second Wednesday of each month; <br />
**Phone: 1-877-668-4493<br />
**Meeting Code: 23136782 <br />
* '''Cluster Contacts:''' Chris Lenhardt; Nic Weber<br />
<br />
|}<br />
<br /><br />
<br />
<br />
<br />
<br />
{{Backlink}}<br />
[[WS::{{PAGENAMEE}}]][[category:CollabArea]]</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=20142410_Telecon&diff=4801720142410 Telecon2014-10-24T20:09:39Z<p>Nicholas.m.weber: Created page with "'''Agenda''' 1. Goings on in the world of Sci. Software: - NIH Software Discovery Index: http://softwarediscoveryindex.org/ - Mozlilla Collaboration portal: http://collabo..."</p>
<hr />
<div>'''Agenda'''<br />
<br />
1. Goings on in the world of Sci. Software:<br />
<br />
- NIH Software Discovery Index: http://softwarediscoveryindex.org/<br />
<br />
- Mozlilla Collaboration portal: http://collaborate.mozillascience.org/<br />
<br />
- A cool new extension of docker to R, creatively called Rocker: http://dirk.eddelbuettel.com/blog/2014/10/23/#introducing_rocker<br />
<br />
2. Winter meeting ideas? We scheduled a session, so we should brainstorm what we think a good use of that time might be...<br />
<br />
3. A few of us are putting together a test-bed proposal for the software cluster:<br />
<br />
The working title is borrowed from ongoing work of a number of other people ---> "Minimal metadata schemas for science software and code, in JSON and XML."<br />
<br />
<br />
'''Notes from meeting'''<br />
<br />
<br />
We spent first half of the meeting brainstorming on a testbed proposal that can be found here: <br />
<br />
https://github.com/nniiicc/ESIP_TestBed_CodeMinMeta<br />
<br />
<br />
---<br />
<br />
IDEAS for winter meeting<br />
<br />
Our general idea is to build upon the recommendations from the summer meeting<br />
<br />
Examples of potential ways to incentivize software contribution (i.e. badges) , Award for best software effort, etc. <br />
<br />
<br />
The session might work as follows: <br />
<br />
- Begin with overview of recommendations ( Bob Downs volunteered to do this)<br />
- Assign people to lead small discussion on most promising areas (3-4)<br />
- Criteria for selection should be easy / low hanging fruit <br />
<br />
To do: Nic revise the session on the commons and email group the recommendations from WSSSPE paper.<br />
<br />
---<br />
<br />
Categories from WSSSPE paper: <br />
<br />
- Collaboration<br />
- Publications and Presentations<br />
- Workshops, training and best practices<br />
- Develop and document best practices<br />
- Incentives and motivations<br />
- Reviewed software repository<br />
<br />
--- <br />
<br />
A Policy statement on Software for Earth Science Research: <br />
<br />
Inspired by http://www.change.org/p/everyone-in-the-research-community-we-must-accept-that-software-is-fundamental-to-research-or-we-will-lose-our-ability-to-make-groundbreaking-discoveries<br />
<br />
ESIP has done policy statement related to data access and citations - so should ESIP take this on - should this group be responsible for writing that statement - or driving the writing of this statement? <br />
<br />
Software cluster agreed that a potential next step for ESIP is to draft and distribute to partners a statement about importance of sustaining research software. <br />
<br />
Nic recommends working with http://www.isi.edu/ikcap/geosoft/ group if we decide to do this. <br />
<br />
--- <br />
<br />
For next meeting: <br />
<br />
- Review WSSSPE<br />
- Further discuss the policy statement, and assign tasks for winter meeting.</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=Science_Software/Archived_Software_Science_Events&diff=48016Science Software/Archived Software Science Events2014-10-24T20:07:45Z<p>Nicholas.m.weber: </p>
<hr />
<div>* 2014-10-24 Telecon [[20142410 Telecon| Telecon Agenda & Notes]]<br />
* 2014-05-14 Telecon [[20141405 Telecon| Telecon Agenda & Notes]]<br />
* 2014-04-09 Telecon [[20140904 Telecon| Telecon Agenda & Notes]]<br />
* 2014-03-12 Telecon [[20141203 Telecon| Telecon Agenda & Notes]]<br />
<noinclude> <br />
* 2013-10-09 Telecon [[20131009 Telecon| Telecon Notes]]<br />
* 2013-07: Cluster Formed<br />
</noinclude></div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=20141405_Telecon&diff=4686320141405 Telecon2014-05-20T00:04:11Z<p>Nicholas.m.weber: </p>
<hr />
<div>'''Software Cluster Telecon''' ''05.14.2014''<br />
<br />
'''Agenda'''<br />
<br />
Most of today's telecon will be spent reviewing proposed sessions for the summer meeting, "Linking It Together: Sustainable Software Advancing Science Data and Services" The working [[https://docs.google.com/spreadsheet/ccc?key=0ArDAFB2BsbfRdEI1NGtUa2tpNFdlODlWUDJGNHZYeHc&usp=drive_web#gid=1 agenda]] has already been posted, and includes at least three science software related sessions:<br />
<br />
- Software metrics led by James Howison<br />
<br />
- Building a community around a software package led by Ethan White<br />
<br />
- Software Citation led by Matt Mayernik and Nic Weber<br />
<br />
<br />
'''Sci Software Updates'''<br />
<br />
- The NIH held a 2 day workshop this week on "Discovering, Citing, Tracking Biomedical Software" - although the focus was on biomed, lots of the discussions were relevant to ESIP community. [[http://videocast.nih.gov/summary.asp?live=14073&bhcp=1 Day 1 Video]] & [[http://videocast.nih.gov/summary.asp?live=14171&bhcp=1 Day 2 Video]].1/4 of the way through Day 2 video is 20 minute presentation by Phil Bourne, newly appointed head of "Big Data" at NIH, that is worth watching.<br />
<br />
- Notable papers posted to ArXiv [[http://arxiv.org/pdf/1405.1873 Change Management and Version Control of Scientific Applications]] is a small survey about version control.<br />
<br />
- Dan Katz announced a second WSSSPE at SC 14 in New Orleans [[http://wssspe.researchcomputing.org.uk/wssspe2/ CFP]] and revised the review of the first [[http://arxiv.org/abs/1311.3523 workshop]].<br />
<br />
'''Telecon Notes'''<br />
<br />
14.05.2014<br />
<br />
Started off talking about whats happening in the world of Software (see agenda).<br />
<br />
''Erin brief on summer meeting:''<br />
<br />
- Yolanda Gil and Dan Katz to keynote<br />
<br />
- Want to have takeaways and evaluative criteria for whether or not a targeted theme (i.e. software) makes an impact on ESIP community<br />
<br />
- Working with J. Howison to think about how to measure this<br />
<br />
- Ref. to Gil's recent pub on caring for your data<br />
<br />
- Idea is to generate lists - i.e 10 simple things to improve software stewardship. <br />
<br />
''Roundtable discussion:''<br />
<br />
- Proposed by Lenhardt et al. <br />
<br />
- How should it work? <br />
<br />
- Bob Downs: needs to be very finely scoped<br />
<br />
- Lunch tables dedicated to specific themes? (Tool developers, FLOSS, etc ) or topics (version control, education, etc)<br />
<br />
- Will there be any sort of wrap-up or take away?<br />
<br />
- Potential for using "floating" slots on the schedule for doing just that...perhaps a Friday lunch topic (if people stick around)<br />
<br />
''<br />
Updates from those that have proposed session:''<br />
<br />
Ethan: Idea is to generate best practices, helpful use cases around specific software community - tricks of the trade for sustaining and improving community.<br />
<br />
Bruce C: Working with J. Howison, will discuss the importance of quant. / metrics for software contributions. <br />
<br />
Matt M. Strong tie in to Bruce and James topic... idea is to 1st map between ESIP principles for data citation and software citation - What is missing? What needs to be expanded and changed? Then consider broader picture of aggregating citations, authorship, attribution, etc. Another initial step might be to type software and decide how and when to cite different types (algorithm, script, full software package, library, etc.) <br />
<br />
<br />
All session leaders agreed to think about ways to survey in their session. <br />
<br />
Next steps:<br />
<br />
- Iron out roundtable for Tues (?) lunch, and logistics. <br />
<br />
- Come up with working, pragmatic definitions of sustainability and software so as not to let discussions devolve into "What do we mean when we say X"<br />
<br />
- Reach out to Software Sustainability Institute in the UK to see if they will be participating (or want to)<br />
<br />
- Survey the survey literature in Mendeley group.</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=20141405_Telecon&diff=4686220141405 Telecon2014-05-20T00:02:15Z<p>Nicholas.m.weber: </p>
<hr />
<div>'''Software Cluster Telecon''' ''05.14.2014''<br />
<br />
'''Agenda'''<br />
<br />
Most of today's telecon will be spent reviewing proposed sessions for the summer meeting, "Linking It Together: Sustainable Software Advancing Science Data and Services" The working [[https://docs.google.com/spreadsheet/ccc?key=0ArDAFB2BsbfRdEI1NGtUa2tpNFdlODlWUDJGNHZYeHc&usp=drive_web#gid=1 agenda]] has already been posted, and includes at least three science software related sessions:<br />
<br />
- Software metrics led by James Howison<br />
<br />
- Building a community around a software package led by Ethan White<br />
<br />
- Software Citation led by Matt Mayernik and Nic Weber<br />
<br />
<br />
'''Sci Software Updates'''<br />
<br />
- The NIH held a 2 day workshop this week on "Discovering, Citing, Tracking Biomedical Software" - although the focus was on biomed, lots of the discussions were relevant to ESIP community. [[http://videocast.nih.gov/summary.asp?live=14073&bhcp=1 Day 1 Video]] & [[http://videocast.nih.gov/summary.asp?live=14171&bhcp=1 Day 2 Video]].1/4 of the way through Day 2 video is 20 minute presentation by Phil Bourne, newly appointed head of "Big Data" at NIH, that is worth watching.<br />
<br />
- Notable papers posted to ArXiv [[http://arxiv.org/pdf/1405.1873 Change Management and Version Control of Scientific Applications]] is a small survey about version control.<br />
<br />
- Dan Katz announced a second WSSSPE at SC 14 in New Orleans [[http://wssspe.researchcomputing.org.uk/wssspe2/ CFP]] and revised the review of the first [[http://arxiv.org/abs/1311.3523 workshop]].<br />
<br />
'''Telecon Notes'''<br />
<br />
14.05.2014<br />
<br />
Started off talking about whats happening in the world of Software (see agenda).<br />
<br />
Erin brief on summer meeting:<br />
<br />
- Yolanda Gil and Dan Katz to keynote<br />
- Want to have takeaways and evaluative criteria for whether or not a targeted theme (i.e. software) makes an impact on ESIP community<br />
- Working with J. Howison to think about how to measure this<br />
- Ref. to Gil's recent pub on caring for your data<br />
- Idea is to generate lists - i.e 10 simple things to improve software stewardship. <br />
<br />
Roundtable discussion:<br />
<br />
Proposed by Lenhardt et al. <br />
<br />
How should it work? <br />
<br />
- Bob Downs: needs to be very finely scoped<br />
- Lunch tables dedicated to specific themes?<br />
<br />
- Tool developers, FLOSS, etc <br />
- Will there be any sort of wrap-up or take away?<br />
- Potential for using "floating" slots on the schedule for doing just that...perhaps a Friday lunch topic (if people stick around)<br />
<br />
Updates from those that have proposed session:<br />
<br />
Ethan: Idea is to generate best practices, helpful use cases around specific software community - tricks of the trade for sustaining and improving community.<br />
<br />
Bruce C: Working with J. Howison, will discuss the importance of quant. / metrics for software contributions. <br />
<br />
Matt M. Strong tie in to Bruce and James topic... idea is to 1st map between ESIP principles for data citation and software citation - What is missing? What needs to be expanded and changed? Then consider broader picture of aggregating citations, authorship, attribution, etc. Another initial step might be to type software and decide how and when to cite different types (algorithm, script, full software package, library, etc.) <br />
<br />
<br />
All session leaders agreed to think about ways to survey in their session. <br />
<br />
Next steps:<br />
<br />
- Iron out roundtable for Tues (?) lunch, and logistics. <br />
- Come up with working, pragmatic definitions of sustainability and software so as not to let discussions devolve into "What do we mean when we say X"<br />
- Reach out to Software Sustainability Institute in the UK to see if they will be participating (or want to)<br />
- Survey the survey literature in Mendeley group.</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=20141405_Telecon&diff=4680020141405 Telecon2014-05-14T13:14:40Z<p>Nicholas.m.weber: Created page with "'''Software Cluster Telecon''' ''05.14.2014'' '''Agenda''' Most of today's telecon will be spent reviewing proposed sessions for the summer meeting, "Linking It Together: Su..."</p>
<hr />
<div>'''Software Cluster Telecon''' ''05.14.2014''<br />
<br />
'''Agenda'''<br />
<br />
Most of today's telecon will be spent reviewing proposed sessions for the summer meeting, "Linking It Together: Sustainable Software Advancing Science Data and Services" The working [[https://docs.google.com/spreadsheet/ccc?key=0ArDAFB2BsbfRdEI1NGtUa2tpNFdlODlWUDJGNHZYeHc&usp=drive_web#gid=1 agenda]] has already been posted, and includes at least three science software related sessions:<br />
<br />
- Software metrics led by Bruce Caron<br />
<br />
- Building a community around a software package led by Ethan White<br />
<br />
- Software Citation led by Matt Mayernik and Nic Weber<br />
<br />
<br />
'''Sci Software Updates'''<br />
<br />
- The NIH held a 2 day workshop this week on "Discovering, Citing, Tracking Biomedical Software" - although the focus was on biomed, lots of the discussions were relevant to ESIP community. [[http://videocast.nih.gov/summary.asp?live=14073&bhcp=1 Day 1 Video]] & [[http://videocast.nih.gov/summary.asp?live=14171&bhcp=1 Day 2 Video]].1/4 of the way through Day 2 video is 20 minute presentation by Phil Bourne, newly appointed head of "Big Data" at NIH, that is worth watching.<br />
<br />
- Notable papers posted to ArXiv [[http://arxiv.org/pdf/1405.1873 Change Management and Version Control of Scientific Applications]] is a small survey about version control.<br />
<br />
- Dan Katz announced a second WSSSPE at SC 14 in New Orleans [[http://wssspe.researchcomputing.org.uk/wssspe2/ CFP]] and revised the review of the first [[http://arxiv.org/abs/1311.3523 workshop]].</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=Science_Software&diff=46799Science Software2014-05-14T12:54:19Z<p>Nicholas.m.weber: </p>
<hr />
<div>__NOTOC__<br />
<big><center>'''Welcome to the {{PAGENAME}} Cluster'''</center></big><br />
<br />
The overarching objective of the ESIP Science Software Cluster is to <br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="#FFFFFF"<br />
|bgcolor="lightgreen" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
===[[/Archived Software Science Events|Events and Activities]]===<br />
{{:Science Software/Archived Software Science Events}}<br><br />
20131009 Telecon [[20131009 Telecon| Telecon Notes]]<br />
<br />
20141203 Telecon [[20141203 Telecon| Telecon Agenda & Notes]]<br />
<br />
20140904 Telecon [[20140904 Telecon| Telecon Agenda & Notes]]<br />
<br />
20141405 Telecon [[20141405 Telecon| Telecon Agenda & Notes]]<br />
<br />
[[/Archived Software Science Events|Archive]]<br />
<br />
|bgcolor="lightblue" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Active Collaborations===<br />
* Software Institutes<br />
** Institute for Sustainable Earth and Environmental Software (ISEES) - http://isees.nceas.ucsb.edu<br />
**Water Science Software Institute (WSSI) - http://waters2i2.org<br />
<br />
|}<br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="pink"<br />
|bgcolor="pink" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Resources===<br />
*[http://software-carpentry.org| Software Carpentry]<br />
*[http://www.software.ac.uk| Software Sustainability Institute (UK)]<br />
===Lit===<br />
*[http://www.mendeley.com/groups/3580621/esip-science-software-cluster/| Mendeley Reading Group on SciSoftware]<br />
===Blogs we like===<br />
* [http://neverworkintheory.org/| It will never work in theory]<br />
* [http://www.software.ac.uk/blog| SSI Blog]<br />
* [http://ropensci.org/blog/|R OpenSci] <br />
* [http://software-carpentry.org/blog/index.html| SWC Blog]<br />
* [http://www.third-bit.com/| 3rd bit]<br />
* [http://aosabook.org/blog/| AOSA]<br />
* [http://www.openscience.org/blog/| OpenScience Project]<br />
|bgcolor="#FFFFBB" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
=== Get Involved===<br />
* '''Email List:''' [http://rtpnet.org/mailman/listinfo/esip-sciencesoftware ESIP-Science Software]<br />
* '''[[/ScienceSoftware_Telecons|Telecons:]]'''<br />
** Second Wednesday of each month; <br />
**Phone: <br />
**Meeting Code: <br />
* '''Cluster Contacts:''' Chris Lenhardt; Nic Weber<br />
<br />
|}<br />
<br /><br />
<br />
<br />
<br />
<br />
{{Backlink}}<br />
[[WS::{{PAGENAMEE}}]][[category:CollabArea]]</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=20140904_Telecon&diff=4637720140904 Telecon2014-04-09T18:20:26Z<p>Nicholas.m.weber: </p>
<hr />
<div>'''Software Cluster Telecon''' ''04.10.2014''<br />
<br />
'''Agenda'''<br />
<br />
Sci Software Updates:<br />
<br />
- Mozilla / Github / Figshare project : http://thenextweb.com/dd/2014/03/17/mozilla-science-lab-github-figshare-team-fix-citation-code-academia/<br />
<br />
- Good discussion on software citations : https://github.com/mozillascience/code-research-object/issues/12<br />
<br />
Panels ESIP + AGU <br />
<br />
ESIP - attribution: http://commons.esipfed.org/node/2330<br />
<br />
AGU – Open Source framework (Mattman et al): https://docs.google.com/document/d/1uYnku6YE-4TRspmgThsI17mmSigdjx30Sk5gzcdi7v8/edit<br />
<br />
Software Metrics? https://plus.google.com/112929796403983408632/posts/1U5PKS588WD</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=20140904_Telecon&diff=4637620140904 Telecon2014-04-09T17:31:15Z<p>Nicholas.m.weber: </p>
<hr />
<div>'''Software Cluster Telecon''' ''04.10.2014''<br />
<br />
'''Agenda'''<br />
<br />
Sci Software Updates:<br />
<br />
- Mozilla / Github / Figshare project : http://thenextweb.com/dd/2014/03/17/mozilla-science-lab-github-figshare-team-fix-citation-code-academia/<br />
<br />
- Good discussion on software citations : https://github.com/mozillascience/code-research-object/issues/12<br />
<br />
Panels ESIP + AGU <br />
<br />
ESIP - attribution: http://commons.esipfed.org/node/2330<br />
<br />
AGU – Open Source framework (Mattman et al): https://docs.google.com/document/d/1uYnku6YE-4TRspmgThsI17mmSigdjx30Sk5gzcdi7v8/edit</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=20140904_Telecon&diff=4637520140904 Telecon2014-04-09T17:30:38Z<p>Nicholas.m.weber: </p>
<hr />
<div>'''Software Cluster Telecon'''<br />
04.10.2014<br />
Agenda<br />
<br />
Sci Software Updates:<br />
<br />
- Mozilla / Github / Figshare project : http://thenextweb.com/dd/2014/03/17/mozilla-science-lab-github-figshare-team-fix-citation-code-academia/<br />
<br />
- Good discussion on software citations : https://github.com/mozillascience/code-research-object/issues/12<br />
<br />
Panels ESIP + AGU <br />
<br />
ESIP - attribution: http://commons.esipfed.org/node/2330<br />
<br />
AGU – Open Source framework (Mattman et al): https://docs.google.com/document/d/1uYnku6YE-4TRspmgThsI17mmSigdjx30Sk5gzcdi7v8/edit</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=20140904_Telecon&diff=4637420140904 Telecon2014-04-09T17:30:11Z<p>Nicholas.m.weber: Created page with "**Software Cluster Telecon** 04.10.2014 Agenda Sci Software Updates: - Mozilla / Github / Figshare project : http://thenextweb.com/dd/2014/03/17/mozilla-science-lab-github-f..."</p>
<hr />
<div>**Software Cluster Telecon**<br />
04.10.2014<br />
Agenda<br />
<br />
Sci Software Updates:<br />
<br />
- Mozilla / Github / Figshare project : http://thenextweb.com/dd/2014/03/17/mozilla-science-lab-github-figshare-team-fix-citation-code-academia/<br />
<br />
- Good discussion on software citations : https://github.com/mozillascience/code-research-object/issues/12<br />
<br />
Panels ESIP + AGU <br />
<br />
ESIP - attribution: http://commons.esipfed.org/node/2330<br />
<br />
AGU – Open Source framework (Mattman et al): https://docs.google.com/document/d/1uYnku6YE-4TRspmgThsI17mmSigdjx30Sk5gzcdi7v8/edit</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=Science_Software&diff=46373Science Software2014-04-09T17:28:32Z<p>Nicholas.m.weber: </p>
<hr />
<div>__NOTOC__<br />
<big><center>'''Welcome to the {{PAGENAME}} Cluster'''</center></big><br />
<br />
The overarching objective of the ESIP Science Software Cluster is to <br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="#FFFFFF"<br />
|bgcolor="lightgreen" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
===[[/Archived Software Science Events|Events and Activities]]===<br />
{{:Science Software/Archived Software Science Events}}<br><br />
20131009 Telecon [[20131009 Telecon| Telecon Notes]]<br />
<br />
20141203 Telecon [[20141203 Telecon| Telecon Agenda & Notes]]<br />
<br />
20140904 Telecon [[20140904 Telecon| Telecon Agenda & Notes]]<br />
<br />
[[/Archived Software Science Events|Archive]]<br />
<br />
|bgcolor="lightblue" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Active Collaborations===<br />
* Software Institutes<br />
** Institute for Sustainable Earth and Environmental Software (ISEES) - http://isees.nceas.ucsb.edu<br />
**Water Science Software Institute (WSSI) - http://waters2i2.org<br />
<br />
|}<br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="pink"<br />
|bgcolor="pink" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Resources===<br />
*[http://software-carpentry.org| Software Carpentry]<br />
*[http://www.software.ac.uk| Software Sustainability Institute (UK)]<br />
===Lit===<br />
*[http://www.mendeley.com/groups/3580621/esip-science-software-cluster/| Mendeley Reading Group on SciSoftware]<br />
===Blogs we like===<br />
* [http://neverworkintheory.org/| It will never work in theory]<br />
* [http://www.software.ac.uk/blog| SSI Blog]<br />
* [http://ropensci.org/blog/|R OpenSci] <br />
* [http://software-carpentry.org/blog/index.html| SWC Blog]<br />
* [http://www.third-bit.com/| 3rd bit]<br />
* [http://aosabook.org/blog/| AOSA]<br />
* [http://www.openscience.org/blog/| OpenScience Project]<br />
|bgcolor="#FFFFBB" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
=== Get Involved===<br />
* '''Email List:''' [http://rtpnet.org/mailman/listinfo/esip-sciencesoftware ESIP-Science Software]<br />
* '''[[/ScienceSoftware_Telecons|Telecons:]]'''<br />
** Second Wednesday of each month; <br />
**Phone: <br />
**Meeting Code: <br />
* '''Cluster Contacts:''' Chris Lenhardt; Nic Weber<br />
<br />
|}<br />
<br /><br />
<br />
<br />
<br />
<br />
{{Backlink}}<br />
[[WS::{{PAGENAMEE}}]][[category:CollabArea]]</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=20141203_Telecon&diff=4603320141203 Telecon2014-03-24T16:26:17Z<p>Nicholas.m.weber: </p>
<hr />
<div>'''March 12, Agenda'''<br />
<br />
* Sci-Software updates<br />
* Planning for Summer Meeting<br />
** Theme is [http://commons.esipfed.org/2014SummerMeeting "Linking It Together: Sustainable Software Advancing Science Data and Services"]<br />
* Future telecon guests<br />
** R Open Science project<br />
<br />
=== ESIP Software Cluster Telecon Notes, === <br />
Wed March 12, 2014<br />
<br />
'''Goings on in the world of SciSoftware'''<br />
<br />
- Earth Cube workshop in Boulder on OSS wrap up<br />
- - Overall sentiment was that Earth Cube should have a Technical Advisory board but they were not the one to do it.<br />
- - From this discussion we generated the idea to host an Open Source Software / Business Application Roundtable as part of the Summer Session (potential participants :David Fulker (gov / industry), James Howison (academic), etc.)<br />
<br />
- Software Sustainability Institute PI Meeting in Washington D.C (last week)<br />
- - (someone was to provide link to Google Doc that overviewed presentations)<br />
<br />
'''Summer Meeting Brainstorm:'''<br />
<br />
Software bootcamp is on the schedule (Probably take place on Thursday or Friday so as not to interrupt the plenaries).<br />
<br />
Invite someone from the iPython project as a speaker ... potentially get someone to talk bout iPython use in breakout session<br />
<br />
Nic's suggestion to invite someone from R OpenSci project (i.e. Ted Hardt, Carl B., Karthik Ram)<br />
<br />
Reach out to WSSSPE organizers, at very least to advertise topic of summer meeting http://wssspe.researchcomputing.org.uk/ for<br />
potential sessions to be proposed<br />
<br />
Software citations - (Nic's note: Matt Mayernik and I are proposing session about attribution beyond citations)<br />
Ethan Davis Unidata - potentially leading session about building software community with users ... iPython<br />
Potential participants for this Ethan's session include Data One members (User group meeting is immediately before ESIP)<br />
<br />
To Do:<br />
- Software attribution session<br />
- WSSSPE outreach<br />
- Potential follow up w/ Neil @ (SSI)</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=20141203_Telecon&diff=4593620141203 Telecon2014-03-17T22:01:00Z<p>Nicholas.m.weber: </p>
<hr />
<div>'''March 12, Agenda'''<br />
<br />
* Sci-Software updates<br />
* Planning for Summer Meeting<br />
** Theme is [http://commons.esipfed.org/2014SummerMeeting "Linking It Together: Sustainable Software Advancing Science Data and Services"]<br />
* Future telecon guests<br />
** R Open Science project<br />
<br />
ESIP Software Cluster Telecon Notes, <br />
Wed March 12, 2014<br />
<br />
'''Goings on in the world of SciSoftware'''<br />
<br />
- Earth Cube workshop in Boulder on OSS wrap up<br />
- - Overall sentiment was that Earth Cube should have a Technical Advisory board but they were not the one to do it.<br />
- - From this discussion we generated the idea to host an Open Source Software / Business Application Roundtable as part of the Summer Session (potential participants :David Fulker (gov / industry), James Howison (academic), etc.)<br />
<br />
- Software Sustainability Institute PI Meeting in Washington D.C (last week)<br />
- - (someone was to provide link to Google Doc that overviewed presentations)<br />
<br />
'''Summer Meeting Brainstorm:'''<br />
<br />
Software bootcamp is on the schedule (Probably take place on Thursday or Friday so as not to interrupt the plenaries).<br />
<br />
Invite someone from the iPython project as a speaker ... potentially get someone to talk bout iPython use in breakout session<br />
<br />
Nic's suggestion to invite someone from R OpenSci project (i.e. Ted Hardt, Carl B., Karthik Ram)<br />
<br />
Reach out to WSSSPE organizers, at very least to advertise topic of summer meeting http://wssspe.researchcomputing.org.uk/ for<br />
potential sessions to be proposed<br />
<br />
Software citations - (Nic's note: Matt Mayernik and I are proposing session about attribution beyond citations)<br />
Ethan Davis Unidata - potentially leading session about building software community with users ... iPython<br />
Potential participants for this Ethan's session include Data One members (User group meeting is immediately before ESIP)<br />
<br />
To Do:<br />
- Software attribution session<br />
- WSSSPE outreach<br />
- Potential follow up w/ Neil @ (SSI)</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=Science_Software&diff=45906Science Software2014-03-10T23:01:40Z<p>Nicholas.m.weber: /* Resources */</p>
<hr />
<div>__NOTOC__<br />
<big><center>'''Welcome to the {{PAGENAME}} Cluster'''</center></big><br />
<br />
The overarching objective of the ESIP Science Software Cluster is to <br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="#FFFFFF"<br />
|bgcolor="lightgreen" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
===[[/Archived Software Science Events|Events and Activities]]===<br />
{{:Science Software/Archived Software Science Events}}<br><br />
20131009 Telecon [[20131009 Telecon| Telecon Notes]]<br />
<br />
20141203 Telecon [[20141203 Telecon| Telecon Agenda & Notes]]<br />
<br />
[[/Archived Software Science Events|Archive]]<br />
<br />
|bgcolor="lightblue" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Active Collaborations===<br />
* Software Institutes<br />
** Institute for Sustainable Earth and Environmental Software (ISEES) - http://isees.nceas.ucsb.edu<br />
**Water Science Software Institute (WSSI) - http://waters2i2.org<br />
<br />
|}<br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="pink"<br />
|bgcolor="pink" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Resources===<br />
*[http://software-carpentry.org| Software Carpentry]<br />
*[http://www.software.ac.uk| Software Sustainability Institute (UK)]<br />
===Lit===<br />
*[http://www.mendeley.com/groups/3580621/esip-science-software-cluster/| Mendeley Reading Group on SciSoftware]<br />
===Blogs we like===<br />
* [http://neverworkintheory.org/| It will never work in theory]<br />
* [http://www.software.ac.uk/blog| SSI Blog]<br />
* [http://ropensci.org/blog/|R OpenSci] <br />
* [http://software-carpentry.org/blog/index.html| SWC Blog]<br />
* [http://www.third-bit.com/| 3rd bit]<br />
* [http://aosabook.org/blog/| AOSA]<br />
* [http://www.openscience.org/blog/| OpenScience Project]<br />
|bgcolor="#FFFFBB" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
=== Get Involved===<br />
* '''Email List:''' [http://rtpnet.org/mailman/listinfo/esip-sciencesoftware ESIP-Science Software]<br />
* '''[[/ScienceSoftware_Telecons|Telecons:]]'''<br />
** Second Wednesday of each month; <br />
**Phone: <br />
**Meeting Code: <br />
* '''Cluster Contacts:''' Chris Lenhardt; Nic Weber<br />
<br />
|}<br />
<br /><br />
<br />
<br />
<br />
<br />
{{Backlink}}<br />
[[WS::{{PAGENAMEE}}]][[category:CollabArea]]</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=Science_Software&diff=45905Science Software2014-03-10T22:42:57Z<p>Nicholas.m.weber: /* Get Involved */</p>
<hr />
<div>__NOTOC__<br />
<big><center>'''Welcome to the {{PAGENAME}} Cluster'''</center></big><br />
<br />
The overarching objective of the ESIP Science Software Cluster is to <br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="#FFFFFF"<br />
|bgcolor="lightgreen" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
===[[/Archived Software Science Events|Events and Activities]]===<br />
{{:Science Software/Archived Software Science Events}}<br><br />
20131009 Telecon [[20131009 Telecon| Telecon Notes]]<br />
<br />
20141203 Telecon [[20141203 Telecon| Telecon Agenda & Notes]]<br />
<br />
[[/Archived Software Science Events|Archive]]<br />
<br />
|bgcolor="lightblue" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Active Collaborations===<br />
* Software Institutes<br />
** Institute for Sustainable Earth and Environmental Software (ISEES) - http://isees.nceas.ucsb.edu<br />
**Water Science Software Institute (WSSI) - http://waters2i2.org<br />
<br />
|}<br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="pink"<br />
|bgcolor="pink" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Resources===<br />
*[http://software-carpentry.org| Software Carpentry]<br />
*[http://www.software.ac.uk| Software Sustainability Institute (UK)]<br />
|bgcolor="#FFFFBB" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
=== Get Involved===<br />
* '''Email List:''' [http://rtpnet.org/mailman/listinfo/esip-sciencesoftware ESIP-Science Software]<br />
* '''[[/ScienceSoftware_Telecons|Telecons:]]'''<br />
** Second Wednesday of each month; <br />
**Phone: <br />
**Meeting Code: <br />
* '''Cluster Contacts:''' Chris Lenhardt; Nic Weber<br />
<br />
|}<br />
<br /><br />
<br />
<br />
<br />
<br />
{{Backlink}}<br />
[[WS::{{PAGENAMEE}}]][[category:CollabArea]]</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=20141203_Telecon&diff=4590420141203 Telecon2014-03-10T22:40:56Z<p>Nicholas.m.weber: Created page with "'''March 12, Agenda''' * Sci-Software updates * Planning for Summer Meeting ** Theme is [http://commons.esipfed.org/2014SummerMeeting "Linking It Together: Sustainable Softwa..."</p>
<hr />
<div>'''March 12, Agenda'''<br />
<br />
* Sci-Software updates<br />
* Planning for Summer Meeting<br />
** Theme is [http://commons.esipfed.org/2014SummerMeeting "Linking It Together: Sustainable Software Advancing Science Data and Services"]<br />
* Future telecon guests<br />
** R Open Science project</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=Science_Software&diff=45903Science Software2014-03-10T22:34:59Z<p>Nicholas.m.weber: /* Events and Activities */</p>
<hr />
<div>__NOTOC__<br />
<big><center>'''Welcome to the {{PAGENAME}} Cluster'''</center></big><br />
<br />
The overarching objective of the ESIP Science Software Cluster is to <br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="#FFFFFF"<br />
|bgcolor="lightgreen" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
===[[/Archived Software Science Events|Events and Activities]]===<br />
{{:Science Software/Archived Software Science Events}}<br><br />
20131009 Telecon [[20131009 Telecon| Telecon Notes]]<br />
<br />
20141203 Telecon [[20141203 Telecon| Telecon Agenda & Notes]]<br />
<br />
[[/Archived Software Science Events|Archive]]<br />
<br />
|bgcolor="lightblue" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Active Collaborations===<br />
* Software Institutes<br />
** Institute for Sustainable Earth and Environmental Software (ISEES) - http://isees.nceas.ucsb.edu<br />
**Water Science Software Institute (WSSI) - http://waters2i2.org<br />
<br />
|}<br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="pink"<br />
|bgcolor="pink" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Resources===<br />
*[http://software-carpentry.org| Software Carpentry]<br />
*[http://www.software.ac.uk| Software Sustainability Institute (UK)]<br />
|bgcolor="#FFFFBB" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
=== Get Involved===<br />
* '''Email List:''' [http://rtpnet.org/mailman/listinfo/esip-sciencesoftware ESIP-Science Software]<br />
* '''[[/ScienceSoftware_Telecons|Telecons:]]'''<br />
** TBD; <br />
**Phone: <br />
**Meeting Code: <br />
* '''Cluster Contacts:''' Chris Lenhardt<br />
<br />
|}<br />
<br /><br />
<br />
<br />
<br />
<br />
{{Backlink}}<br />
[[WS::{{PAGENAMEE}}]][[category:CollabArea]]</div>Nicholas.m.weberhttps://wiki.esipfed.org/w/index.php?title=Science_Software&diff=45902Science Software2014-03-10T22:34:38Z<p>Nicholas.m.weber: /* Events and Activities */</p>
<hr />
<div>__NOTOC__<br />
<big><center>'''Welcome to the {{PAGENAME}} Cluster'''</center></big><br />
<br />
The overarching objective of the ESIP Science Software Cluster is to <br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="#FFFFFF"<br />
|bgcolor="lightgreen" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
===[[/Archived Software Science Events|Events and Activities]]===<br />
{{:Science Software/Archived Software Science Events}}<br><br />
20131009 Telecon [[20131009 Telecon| Telecon Notes]]<br />
20141203 Telecon [[20141203 Telecon| Telecon Agend & Notes]]<br />
<br />
[[/Archived Software Science Events|Archive]]<br />
<br />
|bgcolor="lightblue" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Active Collaborations===<br />
* Software Institutes<br />
** Institute for Sustainable Earth and Environmental Software (ISEES) - http://isees.nceas.ucsb.edu<br />
**Water Science Software Institute (WSSI) - http://waters2i2.org<br />
<br />
|}<br />
{| width="100%" cellpadding="0" cellspacing="0" style="zborder-top:1px solid #aaaaaa; border-collapse: collapse;" <br />
|- valign="top" bgcolor="pink"<br />
|bgcolor="pink" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
===Resources===<br />
*[http://software-carpentry.org| Software Carpentry]<br />
*[http://www.software.ac.uk| Software Sustainability Institute (UK)]<br />
|bgcolor="#FFFFBB" style="border: 1px solid gray;padding-left:0.5em;padding-right:0.5em;" width="50%"|<br />
<br />
=== Get Involved===<br />
* '''Email List:''' [http://rtpnet.org/mailman/listinfo/esip-sciencesoftware ESIP-Science Software]<br />
* '''[[/ScienceSoftware_Telecons|Telecons:]]'''<br />
** TBD; <br />
**Phone: <br />
**Meeting Code: <br />
* '''Cluster Contacts:''' Chris Lenhardt<br />
<br />
|}<br />
<br /><br />
<br />
<br />
<br />
<br />
{{Backlink}}<br />
[[WS::{{PAGENAMEE}}]][[category:CollabArea]]</div>Nicholas.m.weber